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Course10210309253 lectures

Data Analysis For Biologists

Prof. Biplab Bose · IIT Guwahati

Start with lecture 1 At NPTEL

Lectures

Week 1: Basic Concepts of Probability and Statistics

  1. Lec 1: Rules of probability Video
  2. Lec 2: Discrete probability distribution Video
  3. Lec 3: Continuous probability distribution Video
  4. Lecture 4: Statistics using R – Descriptive Statistics Video
  5. Lec 5: Moments: variance and covariance Video
  6. Lecture 6: Linear Algebra using R Video
  7. Lec 7: Concept of statistical tests Video

Week 2: Basic Concepts of Linear Algebra

  1. Lec 8: Vector and vector operations Video
  2. Lec 9: Matrix and matrix operations Video
  3. Lec 10: Determinant and Inverse of a matrix Video
  4. Lec 11: Eigenvalue and eigenvector Video
  5. Lec 12: Linear system of equations Video
  6. Lec 13: Singular value decomposition Video

Week 3: Basics of R

  1. Lec 14: Getting ready with R Video
  2. Lec 15: Algebraic and logical operations in R Video
  3. Lec 16: Reading and writing data Video
  4. Lec 17: Statistics using R – descriptive statistics Video
  5. Lec 18: Statistics using R – t-test and ANOVA Video
  6. Lec 19: Linear algebra using R Video

Week 4: Data Visualization

  1. Lec 20: Scatter plot, Line plot & Bar plot Video
  2. Lec 21: Histogram & Box plot Video
  3. Lec 22: Heatmap and Volcano plot Video
  4. Lec 23: Network visualization Video
  5. Lec 24: Data visualization using ggplot2 - I Video
  6. Lec 25: Data visualization using ggplo2 - II Video

Week 5: Correlation and Regression

  1. Lec 26: Correlations Video
  2. Lec 27: Linear regression - I Video
  3. Lec 28: Linear regression - II Video
  4. Lec 29: Linear regression using R Video
  5. Lec 30: Multiple linear regression Video
  6. Lec 31: Multiple linear regression using R Video

Week 6: Regression, Clustering and Classification

  1. Lec 32: Nonlinear regression Video
  2. Lec 33: Nonlinear regression using R Video
  3. Lec 34: Clustering and classification Video
  4. Lec 35: Logistic regression Video
  5. Lec 36: Logistic regression using R Video
  6. Lec 37: Distance mesaures for clustering Video

Week 7: Clustering and Classification

  1. Lec 38: k-means clustering Video
  2. Lec 39: k-means clustering using R Video
  3. Lec 40: Hierarchical clustering Video
  4. Lec 41: Hierarchical clustering using R Video
  5. Lec 42: Decision tree classifier Video
  6. Lec 43: Support vector machines Video

Week 8: Analysis of Higher-Dimensional Data

  1. Lec 44: Higher-dimensional data in biology Video
  2. Lec 45: Principle component analysis Video
  3. Lec 46: Principle component analysis using R Video
  4. Lecture 4: Statistics using R – Descriptive Statistics Video
  5. Lec 48: t-SNE using R Video
  6. Lecture 6: Linear Algebra using R Video

Live Session

  1. Live Session 08-02-2024 Video
  2. Live Session 07-03-2024 Video
  3. Live Session 12-02-2025 Video
  4. Live Session 05-03-2025 Video

Syllabus and materials

At NPTEL, as the course publishes them.

Credits and licence

Institution
IIT Guwahati
Department
Biotechnology
Teacher
Prof. Biplab Bose
Level
Undergraduate
Language
English
Subjects
Biology
Source
NPTEL
Licence
CC BY-NC-SA, as NPTEL states it. Non-commercial use only. NPTEL's terms
Attribution
NPTEL states: "Distributed under Creative Commons Attribution-ShareAlike / CC BY - NC - SA", beside a BY-NC-SA badge.
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