Learn · Computational Genomics

Lecture 48 of 53Live Session

Live Session 02-03-2024

Prof. Vineet Kumar Sharma · IISER Bhopal

Credits and licence

From
Computational Genomics, IISER Bhopal (at NPTEL)
Licence
CC BY-NC-SA, as NPTEL states it. Non-commercial use only.
Attribution
NPTEL states: "Distributed under Creative Commons Attribution-ShareAlike / CC BY - NC - SA", beside a BY-NC-SA badge. Coordinated by IIT Madras.
Who can watch
Teens profiles and older. How courses are placed

All the lectures

  1. Introduction to Different OMICS Approaches and their Applications Video
  2. Genetic Information in Prokaryotic Video
  3. Databases and Web Resources to Store and Access the Biological Data Video
  4. First and Second Generation Sequencing Technologies Video
  5. Long Read Sequencing and Linked Read Sequencing - Part 01 Video
  6. Long Read Sequencing and Linked Read Sequencing - Part 02 Video
  7. Sequence Formats and Databases for Genomic Analysis Video
  8. Introduction to Linux Video
  9. File Handling and Remote Connectivity in Linux Video
  10. Running Linux Commands and Installation of Genomic Packages Video
  11. Introduction to R and Applications in Genomic Analysis Video
  12. Publicly Available Tools and Need for Workstations for Genomic Analysis Video
  13. Overview of Genomic and Transcriptomic Analysis Video
  14. Genomic and Transcriptomic Analysis of an Organism with Case Studies Video
  15. How to Collect & Confirm Sample of the Species to be Sequenced & Transcriptome Sequencing Approaches Video
  16. Estimating the Amount of Sequencing Coverage for a Genome and Hybrid Sequencing Approaches Video
  17. Types of Reads, Quality Filtering, Estimating the Genome Complexity and Heterozygosity Video
  18. Genome Assembly and its Completion Status, Assembly Algorithms Video
  19. Commonly Used Assembly Tools Video
  20. Linked-Read Sequencing and Processing Video
  21. Long Reads Analysis and Assembly Workflow Video
  22. De novo Assembly Using Genomic and Transcriptomic Reads Video
  23. Merging Assemblies to Create Hybrid Assembly and Determining the Quality of Assembly Video
  24. Chromosomal Level Assembly and Case Studies Video
  25. Identification and Annotation of Repeats in Genomes Video
  26. De novo Transcriptome Assembly and Making the Coding Gene Set Video
  27. Prediction of tRNA, rRNA and miRNA in a Genome Video
  28. Functional Annotation and Identification of Metabolic Pathways in a Genome Video
  29. Comprehensive Functional Annotation of Predicted Genes in a Genome Video
  30. Functional Annotation of Predicted Genes by Alternate Methods Video
  31. Methods and Steps to Perform the Evolutionary Analysis of a Genome Video
  32. Methods for Taxonomic Classification and Phylogeny Econstruction and Analysis Video
  33. Epigenetics, ChIp-seq, Transcriptome and Microarrays for Regulation of Expression Video
  34. Single Cell Genomics, 10X Chromium Linked-reads and Illumina Sequencing, Single Cell Gene Expression Video
  35. Application of Multiomics Approaches in Human Health and Diseases Such as Cancer, Diabetes, etc. Video
  36. Prokaryotic Genome Sequencing and Assembly Approaches Video
  37. Gene Prediction Approaches and Common Methods for Bacterial Gene Prediction Video
  38. Common Methods for Annotation of a Bacterial Genome, t-RNA, rRNA, Operon Prediction and Annotation Video
  39. Phylogenetic Analysis of Bacterial Genomes Video
  40. Metabolic and Comparative Analysis Video
  41. Microbiome and Metagenome, Human, Organismal and Environmental Microbiomes Video
  42. Sequencing and Assembly of Metagenomes, Gene Prediction, Annotation, MAGs (Part 1) Video
  43. Sequencing and Assembly of Metagenomes, Gene Prediction, Annotation, MAGs (Part 2) Video
  44. Taxonomic Analysis Using Amplicon Sequence Variants, Statistical Analysis Video
  45. Live Session 10-02-2024 Video
  46. Live Session 17-02-2024 Video
  47. Live Session 24-02-2024 Video
  48. Live Session 02-03-2024 Video
  49. Live Session 09-03-2024 Video
  50. Live Session 16-03-2024 Video
  51. Live Session 30-03-2024 Video
  52. Live Session 06-04-2024 Video
  53. Live Session 13-04-2024 Video