9.7: Other Methods

Computational Biology - Genomes, Networks, and Evolution · LibreTexts

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    From LibreTexts, under CC BY-NC-SA 4.0, as the source states it; its equations are written in TeX, which the PDF shows typeset. This page at LibreTexts.

    Besides HMMs and CRFs, other methods do exist for computational gene identification. Semi-markov models generate variable sequence length emissions, meaning that the transitions are not entirely memory-less on the hidden states.

    Max-min models are adaptations of support vector machines. These methods have not yet been applied to mammalian genomes.4

    4 For better understanding of SVM: http://dspace.mit.edu/bitstream/hand...663/6-034Fall- 2002/OcwWeb/Electrical-Engineering-and-Computer-Science/6-034Artificial-IntelligenceFall2002/Tools/detail/svmachine.htm

    This page titled 9.7: Other Methods was last modified on Sun, 03 Jan 2021 23:16:15 GMT and is shared under a CC BY-NC-SA 4.0 license and was authored, remixed, and/or curated by Manolis Kellis et al. (MIT OpenCourseWare) via source content that was edited to the style and standards of the LibreTexts platform.