# Thermodynamics for Biological Systems: Classical and Statistical Aspect

- Institution: IIT Madras
- Department: Biotechnology
- Teacher: Prof. G. K. Suraishkumar Prof. Sanjib Senapati
- Level: Undergraduate
- Language: English
- Subjects: Biology
- Source: [NPTEL](https://nptel.ac.in/courses/102106082)
- Licence: [CC BY-NC-SA](https://nptel.ac.in/faq) (Non-commercial use only.)
- Syllabus: [at the source](https://nptel.ac.in/courses/102106082)
- Who can watch: Tweens profiles and older (sources give no ratings; placed by Invisible Network from the source's own words)

## Lectures

1. [Introduction and review](https://invisiblenetwork.ai/learn/nptel/102106082/1d6d42334e0c) (Video)
2. [Review contd.](https://invisiblenetwork.ai/learn/nptel/102106082/b9fbea2d9eaf) (Video)
3. [Need for analysis](https://invisiblenetwork.ai/learn/nptel/102106082/838f7bd941ee) (Video)
4. [Additional Thermodynamic Functions](https://invisiblenetwork.ai/learn/nptel/102106082/e30b13458dcf) (Video)
5. [State and Path Variables](https://invisiblenetwork.ai/learn/nptel/102106082/654849bc9228) (Video)
6. [Equations for a Closed System](https://invisiblenetwork.ai/learn/nptel/102106082/3dcdb336b3ea) (Video)
7. [Chemical Potential](https://invisiblenetwork.ai/learn/nptel/102106082/6abccd74d009) (Video)
8. [Gibbs Duhem equation](https://invisiblenetwork.ai/learn/nptel/102106082/eee4ebe8d89c) (Video)
9. [Maxwell's relations](https://invisiblenetwork.ai/learn/nptel/102106082/2b0f2a383081) (Video)
10. [Inter-relationships between thermodynamic variables contd](https://invisiblenetwork.ai/learn/nptel/102106082/62f7551adda8) (Video)
11. [Some useful mathematical manipulations](https://invisiblenetwork.ai/learn/nptel/102106082/267990f301c6) (Video)
12. [Thermodynamic relations for a closed system with 1 mole of pure substance](https://invisiblenetwork.ai/learn/nptel/102106082/4da5e3dafb9e) (Video)
13. [Maximum work](https://invisiblenetwork.ai/learn/nptel/102106082/e77137e8a218) (Video)
14. [Open systems](https://invisiblenetwork.ai/learn/nptel/102106082/56b254a16b52) (Video)
15. [Equations of state - virial equations](https://invisiblenetwork.ai/learn/nptel/102106082/9a954e377ba9) (Video)
16. [Equations of state - cubic equations](https://invisiblenetwork.ai/learn/nptel/102106082/a607887385d6) (Video)
17. [Volume estimation](https://invisiblenetwork.ai/learn/nptel/102106082/cdaa7c90dc41) (Video)
18. [Volume estimation, contd](https://invisiblenetwork.ai/learn/nptel/102106082/c6469251a6a3) (Video)
19. [Generalized correlations](https://invisiblenetwork.ai/learn/nptel/102106082/1e5065803ec1) (Video)
20. [Generalized correlations (contd)](https://invisiblenetwork.ai/learn/nptel/102106082/51ccfce5808a) (Video)
21. [Residual properties](https://invisiblenetwork.ai/learn/nptel/102106082/840e31d7dcff) (Video)
22. [Residual properties contd.](https://invisiblenetwork.ai/learn/nptel/102106082/c4888adbf538) (Video)
23. [Generalized correlations and residual properties](https://invisiblenetwork.ai/learn/nptel/102106082/7b68bd7ced87) (Video)
24. [Fugacity coefficient estimation](https://invisiblenetwork.ai/learn/nptel/102106082/6357ae9fb033) (Video)
25. [Review of module 3](https://invisiblenetwork.ai/learn/nptel/102106082/c81ca698569d) (Video)
26. [Learning aspects](https://invisiblenetwork.ai/learn/nptel/102106082/386860773f19) (Video)
27. [Chemical potential formulations](https://invisiblenetwork.ai/learn/nptel/102106082/efb3b6c27a42) (Video)
28. [Lewis and Randall rule](https://invisiblenetwork.ai/learn/nptel/102106082/c4a44994cfd2) (Video)
29. [Partial molar properties](https://invisiblenetwork.ai/learn/nptel/102106082/81664ee561fd) (Video)
30. [Partial molar property estimation from mixing experiments](https://invisiblenetwork.ai/learn/nptel/102106082/f1cb3da2ebee) (Video)
31. [Partial molar property estimation (contd.)](https://invisiblenetwork.ai/learn/nptel/102106082/0eac6da2a08c) (Video)
32. [Activity coefficient from excess property](https://invisiblenetwork.ai/learn/nptel/102106082/8d792bc94140) (Video)
33. [Activity coefficient from excess property (contd.)](https://invisiblenetwork.ai/learn/nptel/102106082/01b42eeee150) (Video)
34. [Models for activity coefficient in a binary system](https://invisiblenetwork.ai/learn/nptel/102106082/33d19652cc72) (Video)
35. [Models for activity coefficient for a binary system (contd.)](https://invisiblenetwork.ai/learn/nptel/102106082/3d518a8b16e3) (Video)
36. [Review of module 4](https://invisiblenetwork.ai/learn/nptel/102106082/7312ed1ccb33) (Video)
37. [Criteria for phase equilibrium](https://invisiblenetwork.ai/learn/nptel/102106082/4a8a351ad69d) (Video)
38. [Phase rule for non-reacting systems](https://invisiblenetwork.ai/learn/nptel/102106082/4ac96c6a3db4) (Video)
39. [Clausius Clayperon equation](https://invisiblenetwork.ai/learn/nptel/102106082/485af4c5b366) (Video)
40. [Clausius Clayperon equation (contd.)](https://invisiblenetwork.ai/learn/nptel/102106082/efc21d547095) (Video)
41. [Vapour liquid equilibrium](https://invisiblenetwork.ai/learn/nptel/102106082/df7e99102d57) (Video)
42. [Vapour-liquid equilibrium (contd.)](https://invisiblenetwork.ai/learn/nptel/102106082/9f002962a59e) (Video)
43. [Estimation of fugacity coefficient from P-V-T data at equilibrium](https://invisiblenetwork.ai/learn/nptel/102106082/591f3c656cb3) (Video)
44. [Liquid-liquid and solid-liquid equilibria](https://invisiblenetwork.ai/learn/nptel/102106082/bbde819fc854) (Video)
45. [Review of module 5](https://invisiblenetwork.ai/learn/nptel/102106082/507d5dfdea3d) (Video)
46. [Criteria for bioreaction equilibria](https://invisiblenetwork.ai/learn/nptel/102106082/851507633fb9) (Video)
47. [Phase rule for reacting biosystems](https://invisiblenetwork.ai/learn/nptel/102106082/f44a0972bfcb) (Video)
48. [Equilibrium constants](https://invisiblenetwork.ai/learn/nptel/102106082/98a52b9e0cb5) (Video)
49. [Effect of temperature on the equilibrium constants](https://invisiblenetwork.ai/learn/nptel/102106082/a43e8cb88445) (Video)
50. [Reaction in liquid or solid phases](https://invisiblenetwork.ai/learn/nptel/102106082/1c3b8cb8e162) (Video)
51. [Free energy changes for some bioreactions](https://invisiblenetwork.ai/learn/nptel/102106082/730fd41e72b3) (Video)
52. [Electrolytes](https://invisiblenetwork.ai/learn/nptel/102106082/43b52c08a82d) (Video)
53. [Review of the classical thermodynamics part](https://invisiblenetwork.ai/learn/nptel/102106082/f2602e2235e3) (Video)
54. [Introduction to Statistical thermodynamics](https://invisiblenetwork.ai/learn/nptel/102106082/e85284f73561) (Video)
55. [Concepts of macro and microstates](https://invisiblenetwork.ai/learn/nptel/102106082/667fa213ecb3) (Video)
56. [Thermodynamic probability](https://invisiblenetwork.ai/learn/nptel/102106082/7bd26caf7cad) (Video)
57. [Boltzmann distribution law](https://invisiblenetwork.ai/learn/nptel/102106082/42480cc46d44) (Video)
58. [Defining β in Boltzmann distribution law](https://invisiblenetwork.ai/learn/nptel/102106082/4d084310b54b) (Video)
59. [Relationship between partition function and thermodynamic quantities](https://invisiblenetwork.ai/learn/nptel/102106082/0c83bf6f79e1) (Video)
60. [Partition function of mono atomic gases](https://invisiblenetwork.ai/learn/nptel/102106082/4bc7f5e88e1d) (Video)
61. [Entropy in terms of probablity](https://invisiblenetwork.ai/learn/nptel/102106082/8093faa1fb56) (Video)
62. [Gibbs paradox](https://invisiblenetwork.ai/learn/nptel/102106082/34a95a22ff84) (Video)
63. [Thermodynamic probability for distinguishable particles](https://invisiblenetwork.ai/learn/nptel/102106082/fbbc9026c25e) (Video)
64. [Thermodynamic probability for indistinguishable particles](https://invisiblenetwork.ai/learn/nptel/102106082/d0bfbb83b0d3) (Video)
65. [Sackur - Tetrode equation](https://invisiblenetwork.ai/learn/nptel/102106082/e12cb4a886a5) (Video)
66. [Partition function and Helmholtz and Gibbs free energy](https://invisiblenetwork.ai/learn/nptel/102106082/4ee9a1037fed) (Video)
67. [Ensemble approach](https://invisiblenetwork.ai/learn/nptel/102106082/3f22b9b0fbe3) (Video)
68. [Ensemble average, time average, Ergodic hypothesis](https://invisiblenetwork.ai/learn/nptel/102106082/13c0f708c00e) (Video)
69. [Partition function for classical systems](https://invisiblenetwork.ai/learn/nptel/102106082/dd7a427101bd) (Video)
70. [Pair potentials for atomic systems](https://invisiblenetwork.ai/learn/nptel/102106082/a1fc1df0c1d8) (Video)
71. [Potential for molecular systems](https://invisiblenetwork.ai/learn/nptel/102106082/824b864a7640) (Video)
72. [Computer code for LJ potential](https://invisiblenetwork.ai/learn/nptel/102106082/8c020bd53fe7) (Video)
73. [Introduction to computer simulations](https://invisiblenetwork.ai/learn/nptel/102106082/67f661304fe3) (Video)
74. [Computer simulations of macromolecules](https://invisiblenetwork.ai/learn/nptel/102106082/edb1a3fa6e8a) (Video)
75. [MD simulation examples](https://invisiblenetwork.ai/learn/nptel/102106082/5ffaa6702c50) (Video)
76. [Link between theory and experiments](https://invisiblenetwork.ai/learn/nptel/102106082/6d4c1fa9d4b1) (Video)
77. [MD protocol](https://invisiblenetwork.ai/learn/nptel/102106082/539910dba09a) (Video)
78. [Computer simulation tricks](https://invisiblenetwork.ai/learn/nptel/102106082/7c5c1f0b0880) (Video)
79. [Understanding force fields](https://invisiblenetwork.ai/learn/nptel/102106082/4e909c48f80b) (Video)
80. [Idea of Z-matrix](https://invisiblenetwork.ai/learn/nptel/102106082/fff76ffdee7c) (Video)
81. [Basics of MD simulations](https://invisiblenetwork.ai/learn/nptel/102106082/d0d7cc933e7b) (Video)
82. [Integration algorithms](https://invisiblenetwork.ai/learn/nptel/102106082/7abd60309a7d) (Video)
83. [Calculation of Columbic force](https://invisiblenetwork.ai/learn/nptel/102106082/6b1511c35fda) (Video)
84. [Calculation of LJ force](https://invisiblenetwork.ai/learn/nptel/102106082/c472c22bccbc) (Video)
85. [Monte Carlo simulations](https://invisiblenetwork.ai/learn/nptel/102106082/3aae992a5146) (Video)
86. [Analysis of MD trajectory](https://invisiblenetwork.ai/learn/nptel/102106082/05041eb01534) (Video)
87. [Case study (water)](https://invisiblenetwork.ai/learn/nptel/102106082/d517e2c522a0) (Video)